Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSEIINAIQNNLLVCFPTETVYALACNALDDGAIEKIYQVKKRSQDKPLSIFVSDVCSLVKIAR-LEEKYIDLINHFSPGPITYILPLKNNNML-PNRFFKGSIGIRIPDHPIAISILNRLKIPIVATSINVSGEKSVCKASDIPQSIKQHLSAVIEGDELVSGIESTITDLTGNRIKFLREGIISLQVVNNMLLTEIYRKKNEKINRS
2EQA Chain:A ((17-213))
-IKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTE-RVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEP-VLLRPGPFTIEELKKLFGEIVIYKHYAPNTRL
General information:
TITO was launched using:
RESULT:
Template:
2EQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165811 for 1689 contacts (-98.2/contact) +
2D Compatibility (PS) -20725 + (NN) -6133 + (LL) 332
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -208037.0 ( -123.17 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2EQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQA-query.scw
PDB file :
Tito_Scwrl_2EQA.pdb
: