Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIEILMPALSPTMSKTGGKIVKWCKKEQDRVEVGDVIAEIETDKAIMEFESVDRGVLAKILVSEGTSGVPVNQLIALMLEEGEDKSAIDNYVSVPAVNIEVKEKVVTTSSVSSNPSMSSQCLTQESKKEEGTKTTESRIKVSPLAKKIAQNEGINVRRLKGTGPYGRIIKADVLGFLDSGVQIKNRERSDEDTILEVSNMRQVIAQRLIEAKQNIPHFYLTVECQVDKLISLKNEINSAD-KNNKVTINDLIIKAVAFSMKKFPDINSSWIDNKILRYANIDISIAVALEDGLITPIVKNADEKGILSISKEVKDLVIRARSGKLGPEEFQGGGFTISNLGMFSIKTFSAIINPPQSCIMAIGTSKKQPIVID--EKIEIVEIITVTLSVDHRAVDGVLGAKFLNAFKHYIENPLAMLIEARVNI |
| 3B8K Chain:A ((330-561)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102341 for 1751 contacts (-58.4/contact) +
2D Compatibility (PS) -24942 + (NN) -10488 + (LL) 13268
1D Compatibility (HY) -24800 + (ID) 5500
Total energy: -154803.0 ( -88.41 by residue)
QMean score : 0.401
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