Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKRAHPNAQFKVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNHQHANQRDFNNNQYHSSLSGQYTHINDAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIAEFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIG-EYIVSSRTISASEVSSYNYIH |
2K3A Chain:A ((44-153)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSGSSANLYTAGQCTWYVYDKV---GGNIGSTWGNANNWASAASSAGYTVNNSPEAGSILQSTAGGYGHVAYVENVNSDGSVEVSEMNYNGGPFSVSERTISAGEASSYNYIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56594 for 802 contacts (-70.6/contact) +
2D Compatibility (PS) -11682 + (NN) -4471 + (LL) 6812
1D Compatibility (HY) -8000 + (ID) 3350
Total energy: -77285.0 ( -96.37 by residue)
QMean score : 0.451
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