Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFND-IETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSIALDDVESTAKDVQTAKSSANKDSVSVKGKAPNTL-YIEKRNLMKQKLEMLGEDIDKNKESLQKAKGIAGEKASEYFNKAMN
3BRJ Chain:A ((34-127))
--FNESIDGLIQRIFRKDNFAVQSVVGPLLQDSGPLGDLSVRLKLLFGLGVLPDDIYHDIEDIIKLKNHLNSDASDYEFTDPNILEPIKKLHLVKK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7765 for 527 contacts (14.7/contact) +
2D Compatibility (PS) -9827 + (NN) -3300 + (LL) 2404
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -8908.0 ( -16.90 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_3BRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRJ-query.scw
PDB file :
Tito_Scwrl_3BRJ.pdb
: