Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
4QBA Chain:A ((1-204))
----------------FDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASF------
General information:
TITO was launched using:
RESULT:
Template:
4QBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164148 for 1505 contacts (-109.1/contact) +
2D Compatibility (PS) -21525 + (NN) -4709 + (LL) 2476
1D Compatibility (HY) -32000 + (ID) 10200
Total energy: -230106.0 ( -152.89 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_4QBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBA-query.scw
PDB file :
Tito_Scwrl_4QBA.pdb
: