Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIIVYTQNDCPPCTFVKNYLNEHQIDFEERNI-NNQQYRNEMI-DFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD
3ZIJ Chain:A ((1-76))
MKKIEVYTQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEVVAGFQIEKLQQLLN---
General information:
TITO was launched using:
RESULT:
Template:
3ZIJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57655 for 521 contacts (-110.7/contact) +
2D Compatibility (PS) -7642 + (NN) 553 + (LL) 248
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -74596.0 ( -143.18 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIJ-query.scw
PDB file :
Tito_Scwrl_3ZIJ.pdb
: