Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHGKGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRFIQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAMGWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFITSLPQRHVVPNEGRSVLSGVVIDLDKEGKTK-HIERILINDDHPFSTF
4B2O Chain:D ((1-262))
MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEKIYHSLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGITYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDFHAEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTGPYDGILGMDRETIIKRFKTNLPVRFTVA-EGKTTLSGVVIDIDDQTKKAVKIERILINDDHMF---
General information:
TITO was launched using:
RESULT:
Template:
4B2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164309 for 2338 contacts (-70.3/contact) +
2D Compatibility (PS) -28888 + (NN) -15315 + (LL) 76
1D Compatibility (HY) -27200 + (ID) 8450
Total energy: -244086.0 ( -104.40 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_4B2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B2O-query.scw
PDB file :
Tito_Scwrl_4B2O.pdb
: