Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYIKSQAIANQGYINVRFYENSDTIKVIEN-----NKI---------RFLKLKVGKIIN-------VAKVDIIAFDKKGNINKFGSITIDNN---NSIYRIIFHIEKGRIRYEKL
2KNQ Chain:A ((10-136))
--------------------------------------NTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQIT-PFSLLMANAGTGEPLLTLVCS-GSWPLDQTL-
General information:
TITO was launched using:
RESULT:
Template:
2KNQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16499 for 722 contacts (-22.9/contact) +
2D Compatibility (PS) -11092 + (NN) 1508 + (LL) 4996
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -22837.0 ( -31.63 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2KNQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KNQ-query.scw
PDB file :
Tito_Scwrl_2KNQ.pdb
: