Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLNQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA
3KSF Chain:A ((9-160))
--TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA
General information:
TITO was launched using:
RESULT:
Template:
3KSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102762 for 1176 contacts (-87.4/contact) +
2D Compatibility (PS) -16418 + (NN) -8497 + (LL) 260
1D Compatibility (HY) -22400 + (ID) 7500
Total energy: -157317.0 ( -133.77 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3KSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSF-query.scw
PDB file :
Tito_Scwrl_3KSF.pdb
: