Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTKIWDVREYNEDLQQYPKINEIKDIVLNGGLIGLPTETVYGLAANATDEEAVAKIYEAKGRPSDNPLIVHIHSKVQLKDFTYTLDPRVEKLMQAFWPGPISFILPLKPGYLCRKVSGGLSSVAVRMPSHSVGRQLLQIINEPLAAPSANLSGRPSPTTFNHVYQDLNARIDGIVQAEQSEEGLESTVLDCTSFPYKIARPGSITAAMITEILPNSIAHADYNDTEQPIAPGMKYKHYSPNTPLTIITDIESKIGN--DGKDWSSIAFIVPSNKVAFIPSEAQFIQLCQDDNDVKQASHNLYDVLHSLDENENISAAYIYGFELNDNTEAIMNRMLKAAGNHIIKGCEL |
| 2EQA Chain:A ((11-342)) | --------------NPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTE-RVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEP-VLLRPGPFTIEELKKLFGEIVI----------------YKHYAPNTRLLLVENRNIFKDVVSLLSKKYKVALLIPKELSKEFEGLQ-QIILG-SDENLYEVARNLFDSFRELDKL-NVDLGIMIGFPERGIGFAIMNRARKASGFSIIKA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172886 for 2706 contacts (-63.9/contact) +
2D Compatibility (PS) -33714 + (NN) -21031 + (LL) 2060
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -253021.0 ( -93.50 by residue)
QMean score : 0.484
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