Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILACDVGLKRIGIAA--LLNGVILPLEAILRHNRNQASRDLSDLLRKKDIQVLVVGKP---NESYADTHARIEHFIKLVD--FKGEIVFINEDNSSVEAYENLEHLGKKNKRIATKDGRLDSLSACRILERYCQQVLKKG
1NU0 Chain:A ((4-136))
TLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA-------GGYR---ALNKGKVDSASAVIILESYMEQGY---
General information:
TITO was launched using:
RESULT:
Template:
1NU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72652 for 825 contacts (-88.1/contact) +
2D Compatibility (PS) -12661 + (NN) -1649 + (LL) 1416
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: -91896.0 ( -111.39 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_1NU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NU0-query.scw
PDB file :
Tito_Scwrl_1NU0.pdb
: