Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MCGAQFFRARVLE-F-FTSLFESMKVLKLL-----PNF-LTILR-IVLSLFLL-FLLLNTHTYFSFL----TPFHI-NMISSLVFLFAALTDLLDGY-IARSYKAK-SRFGEIFDPLADKIL-ILSAFLGL---------------VYLDRVNAWVP------------------FVILGREFFISGLRVLAANEKKDIP-------------VNAL--GKYKTV-SQVVAIGALLA-NLTYSY------VLVAIAVFLTLYSGIDYTIK-YYKS---------------- |
| 1W9Y Chain:A ((2-305)) | ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125681 for 1199 contacts (-104.8/contact) +
2D Compatibility (PS) -21173 + (NN) 1478 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -155526.0 ( -129.71 by residue)
QMean score : 0.115
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