Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIILLIVAAVVLFYFYNTLKEYLKNPLNPKTKTEEYDLKNDPYLLVQSSPLDKFKQTQIGAYMRLLKFLDIQKNALDNALRTLFIHELEQPLNSEQQNLAKELLNEPVDKKENFESLCQEIADHTHGEYTKRLKLVEFLMLLAYADGILDSKEKELFLDVGAFLQIDNQDFNELYDNFEHFNSIEIPMSLEEAKNLFEIQTHTTMQDLEKKALDLSAPYYHKMNDNKRYSEQDFISLKKIALASQLLENDLKDS |
| 2H5N Chain:A ((1-132)) | ------------------------------------------MGLGRQSLNIMTFSGQELTAIIKMAKSMVMADGKIKPAEIAVMTREFMR-FGILQDQVDLLLKASDSIEASQAVALIARM------DEERKKYVASYLGVIMASDGDIDDNELALWTLISTLCGLPTMTVMEAINNMKN-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56254 for 908 contacts (-62.0/contact) +
2D Compatibility (PS) -14051 + (NN) -7912 + (LL) 9112
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -76455.0 ( -84.20 by residue)
QMean score : 0.413
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