Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEATTILGYRGEFDNKKFALIGGDGQVTLGNCVV-KANAIKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDHFA--HLEPRKLVEESLKIAGDLCIYTNTNIKILEL
3TY6 Chain:B ((7-183))
-FHATTIFAVH---HNGECAM-AGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDG-ILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL
General information:
TITO was launched using:
RESULT:
Template:
3TY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110557 for 1556 contacts (-71.1/contact) +
2D Compatibility (PS) -18700 + (NN) -7319 + (LL) 540
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -160386.0 ( -103.08 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3TY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TY6-query.scw
PDB file :
Tito_Scwrl_3TY6.pdb
: