Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKIKLEKTTFENAKAECSLVFITNKDFDH-----------VWVKNKKLLETFKYEGE---GAFLD-----QENKILYVGVKED---DVHLLRESACLAVRTLKKLAFKSVKVGVYTCDTHAKDNALLENLKALFLGLKLGLYEYDTFKPNKKES--VLKEVIVALELHKHCEKTCANSLEKSAKEALKYAEIMTESLNIVRDLVNTPPMIGTPVYMAEVAQKVAKEN--HLEIHVHDEKFLEEKKMNAFLAVNKASLAVNPPRLIHLVYKPKK--AKKKIALVGKGLTYDCGGLSLKPADYMVTMKADKGGGSAVIGLLNALAKLGVEAEVHGIIGATENMIGPAAYKPDDILISKEGKSIEVRNTDAEGRLVLADCLSYAQDLSPDVIVDFATLTGACVVGLGEFTSAIMGHNEELKNLFETSGLESGELLAKLPFNRHLKKLIESKIADVCNISSSRYGGAITAGLFLNEFIRDEFKDKWLHIDIAGPAYVEKEWDVNSFGASGAGVRACTAFVEELLKKA |
| 1GYT Chain:A ((1-498)) | -MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS--ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHV--KGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRR---------ELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGS--QNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIG-GRPGGAITAGCFLSRFTRK---YNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFLLNRAGFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274498 for 4303 contacts (-63.8/contact) +
2D Compatibility (PS) -50634 + (NN) -19793 + (LL) 1760
1D Compatibility (HY) -26000 + (ID) 7300
Total energy: -376465.0 ( -87.49 by residue)
QMean score : 0.529
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