Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYDEKKTYQRIEERLEVISSFNAHNEHKNLQDEFKGAGISRRDLLKWAGMMSVTLALPASFAPLTLKAVEVANRLPVIWLHMAECTGCSESLLRSADPTIDSIIFDYINLEYHETIMVASGFQAEKSLHDAIEKHKNNYILMVEGGIPQGTEYFLTQGPNAETGAEEC---------RKVAQHAAAIFAIGTCSSFGGVQAAYPNPSNAQPLHKII-DKPVINVPGCPPSEKNIVGNVLYYLMFGTLPKLDAYNRPSWAYGNRIHDLCERRGHFDAGEIVEHFGDENAKKGFCLYKMGCKRPYTFNNCSKLRFNSHTSWPIGAGHGCIGCSEPNFWDTMSPFEEPLANRSIKTAFDGLGADKVADKVGTTLLSATAIGIAAHALLSKAIKNKE |
3MYR Chain:C ((1-266)) | ------------------------------------------------------------------------ARRPSVIWLSFQECTGCTESLTRAHAPTLEDLILDFISLDYHHTLQAASGEAAEAARLQAMDENRGQYLVIVDGSIP---------GPDANPGFSTVAGHSNYSILMETVEHAAAVIAVGTCAAFGGLPQARPNPTGAMSVMDLVRDKPVINVPGCPPIPMVITGVIAHYLVFGRLPELDGYGRPLAFYGQSIHDRCYRRPFYDKGLFAESFDDEGAKQGWCLYRLGCKGPTTYNACATMKWNDGTSWPVEAGHPCLGCSEPQFWDAGG-FYEPVSVPL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131108 for 2140 contacts (-61.3/contact) +
2D Compatibility (PS) -27105 + (NN) -14167 + (LL) 9516
1D Compatibility (HY) -22400 + (ID) 6350
Total energy: -191614.0 ( -89.54 by residue)
QMean score : 0.380
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