Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNEVQGIGIPTSHASVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKRG
2HC5 Chain:A ((22-108))
-------------------------------NQKDNDNEVPVHQVSYTNLAEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAMTEFLGLFVDEKK
General information:
TITO was launched using:
RESULT:
Template:
2HC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19760 for 490 contacts (-40.3/contact) +
2D Compatibility (PS) -9474 + (NN) -6570 + (LL) 1844
1D Compatibility (HY) -7600 + (ID) 900
Total energy: -42460.0 ( -86.65 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_2HC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HC5-query.scw
PDB file :
Tito_Scwrl_2HC5.pdb
: