Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIDKTECSTLLASIQKQQLVIPVVGNFSAGKSTLLNRFLGSSVLPTGITPETSLATELHYSANERIEAFSSNDEKTESFELNEQSFEAIKENAAKYSYLKVYLNNEALKDSAPLVFVDMPGFDSPISSHTHAILEY----LERGVHFVILTSVEEGNLTKRMVRELKTF
2J69 Chain:A ((51-179))
LERDIEDITIASKNLQQGVFRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGPEKKV-TIHFNDGKSPQ-QLDFQNF--------KYKYTIDPAEAKKLEQEKKQAFPDVD----------YAVVEYPLTLLQKGIEIVDSPGLNDTEARNELSLGYVNN
General information:
TITO was launched using:
RESULT:
Template:
2J69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31412 for 743 contacts (-42.3/contact) +
2D Compatibility (PS) -13033 + (NN) -3540 + (LL) 1024
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -58011.0 ( -78.08 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_2J69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J69-query.scw
PDB file :
Tito_Scwrl_2J69.pdb
: