Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYQLFEFENLEDCHKALIERFKEFFNAALKKHHQVSVAFSGGRSPISLLQKLSVLDLKWHECLISLVDERIIEASHEDSNAKLLHDYLLQNNALKASFTPLLPEKISGDT------NELLDFANQHFKQPHLAILGMGTDGHTASLFPET----SAFLNEEKENIVLTKPTNAPYERLSMSINALENCEKLFLSISGVEKRGVLEKALK-ENAPYSLPIARILHSKKVTTEVFYAKN
3LHI Chain:A ((7-232))
------EYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTNHADSNTGLVREYLLKNKAAAAVWIPMVED---GKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGVALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREY--PISLVLNHQGVNCHVFYAE-
General information:
TITO was launched using:
RESULT:
Template:
3LHI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135255 for 1836 contacts (-73.7/contact) +
2D Compatibility (PS) -22938 + (NN) -12576 + (LL) 864
1D Compatibility (HY) -16400 + (ID) 4400
Total energy: -190705.0 ( -103.87 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3LHI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LHI-query.scw
PDB file :
Tito_Scwrl_3LHI.pdb
: