Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTDFSHITDIEGMRFVNEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKFGATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDIALDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
1WD5 Chain:A ((1-207))
-------------MRFRDRRHAGALLAEALAP--LGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYA--DQSYLEREAARQRDV-LRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARA-EVVALSVPQDFAAVGAYYLDFGEVTDEDVEAILLEWAG-------
General information:
TITO was launched using:
RESULT:
Template:
1WD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179355 for 1767 contacts (-101.5/contact) +
2D Compatibility (PS) -21813 + (NN) -4905 + (LL) 1020
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -217853.0 ( -123.29 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1WD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WD5-query.scw
PDB file :
Tito_Scwrl_1WD5.pdb
: