Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE----VKTLCKQLKIS-------NFRASISQIKNGMM---DLSVQDSECYK-----AYELYQNALKKDNLVDFDDLLCLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVICKEYPTQKEESLDVAYQIKALLKKGE-NLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLNLEEALKIGAFK-DKLNPKNEYALKKFTAMIGRLREAFE-ISVEKFCERFLEETNLLKSYEKEDNYEEREGF--VKELLSLVKEHFKTNPTHSLLDFLNESAL-----DVHNTENAQK---VSCMSVHMSKGLEFKHVFVIGLEEGFFPH-RGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKISCSPSVFLEE--AQLLQQ----DKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF |
| 3PJR Chain:A ((6-652)) | ----EQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAE-DVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRASTYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTIDKLVRYAADHELSLFEAL--GELEMIGLGAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLALISDLDE---TEQAAEGDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAYVGITRAEEELVLTSAQMRTLFGNIQMDPPSRFLNEIPAHLLETASRR------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231977 for 4900 contacts (-47.3/contact) +
2D Compatibility (PS) -66454 + (NN) -41809 + (LL) 3572
1D Compatibility (HY) -50400 + (ID) 11800
Total energy: -398868.0 ( -81.40 by residue)
QMean score : 0.452
|
|
|