Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLVALLKYMQENYGEQRTNYPMAGNEVAKKFKQGVKTAFETTLLGEDYEI--SASIGTGGWANVPWIAVHDKEISTSVQEGVNLVYLFTNDYQGVYLSLNQGYTYVNKNYKNTKLTLGKIARFWQGNLSTLKSENGFTIDPINLGRKESRYTNLVKGYESCNIYSKYYDIKDLEETDNDLLSQDLLQMLTVFKELKGHLMLDDKKGIEATIDFIINNGTFNELSEKAKSEKIVEIEKKRKLVLGKEETHSRNSVVKEEKVPYITKRDYAKEAIRNTEKGLQGEYLVINYEKERLIKNSITKPYADKINHVA-ESGDGHGYDIISYDINPDAPNEVIEIYIEVKTTTGNRDAPFYLSDNELNVARIKGELYKIYRVYDYNTV----PKLKIIDNLFDETLEIKPINY---IVKGVNQNDKHTKNQLPKNTL |
2QRL Chain:A ((24-394)) | AVTLHLRAETKPLEARAALTPTTVKKLIAKGFKIYVEDSPQSTFNINEYRQAGAIIVPAGSWKTAP---------------RDRIIIGLKEMPETDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYD----LEFLENDQGRRVAAF-GFYAGFAGAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKVGIPDAN-----------------------ILKWDIKETSRGGPFDEIPQADIFINCIY-------LSKPIAPFTNMEKLNNPNRRLRTVVDVSADTTNPHNPIPIY---TVATVFNKPTVLVPTT-------AGPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRKTAPVWVRAKKLFDRHCARVKRSSRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28721 for 2997 contacts (9.6/contact) +
2D Compatibility (PS) -37499 + (NN) -9597 + (LL) 4836
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -21139.0 ( -7.05 by residue)
QMean score : ?
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