Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTNRARIDKSIENILKGKNIEEAKLHLPEITSTIKTGFIEKEISEQVYQS------IIGVVSGKLSKIYDLDEDKCKEITSDFIKREQWI---NEIMELVEQDNVTGISDVLLKALKIALGETVKAEQNETYFVEKLLYEIIFLSLENTMQGALETL--EEGITIPQIRKEFIKPLADKLFEEDIKTEIPALVLGKTTLAVINNKIADKLKNFGGF |
3VBB Chain:A ((348-462)) | --------------------------------------------AEEFYQSLGIPYHIVNIVSGSLN-----------HAASKKLDLEAWFPGSGAFRELVSCSNCT---DYQARRLRIRYGQT----MDKVEFVHML--NATMCATTRTICAILENYQTEKGITVPEKLKEFMPP----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11178 for 565 contacts (-19.8/contact) +
2D Compatibility (PS) -10576 + (NN) 1756 + (LL) 7548
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -22300.0 ( -39.47 by residue)
QMean score : 0.184
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