Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LRNMGYIDLHVHIDFYSEPIKIAREYERLKIYVIFVTYLPEIFLKTRYEYDNYKYVRLGVGFHPDMVGEYDFDKNAFERGLQYTRYIGEVGLDFSKSNQQFKEQQIEIFQQIT-SPKYNKGNVYSIHSRKAEVEVLQILKSN-NVKSAIFHWYTGGKHMLKDISDSGYFFSVNHKMLTSKNGIDIIKSIPKSQLLFETDGPFARKEKSIVYPSNFKQIYADFEEV--IPG--FEKIVFSNFKRLLFQKDIDKIN |
| 3GG7 Chain:A ((2-242)) | ----SLIDFHVHLDLYPDPVAVARACEERQLTVLSVTTTPAAWRGTLALAAGRPHVWTALGFHPEVVSERAADLPWFDRYLPETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPRSGTPILHWYSGSVTELRRAISLGCWFSVGPTMVRTQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSKIWQIPASEVERIVKENVSRLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148136 for 2062 contacts (-71.8/contact) +
2D Compatibility (PS) -24971 + (NN) -6943 + (LL) 960
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -199490.0 ( -96.75 by residue)
QMean score : 0.547
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