Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDKLMGKAAIVTESSYGIERFLDEDEQIIQIFKFIRDEVIITSKGIFNIDAQGITGKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTSFSAPISLKVHKNDTEMGFALYKMIKGML
3DCX Chain:A ((22-90))
------------------------DNEQLALAYRVIRDMFVFTNKRLILIDKQGVTGKKVSYHSVPYKAITHFEVETAGTFDMDAELKLWISG-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12700 for 345 contacts (-36.8/contact) +
2D Compatibility (PS) -7375 + (NN) -827 + (LL) 4576
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -24226.0 ( -70.22 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3DCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DCX-query.scw
PDB file :
Tito_Scwrl_3DCX.pdb
: