Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKIIIYSSQYGTSKQYATELSQKKAIPMYSVESI------------------------------P--ES-IVEADEIIYVGSIYMGKVLGF--DKFSKKYKTLSS-KLIVISAGMYDPTRKENTDNIELTVKENLQKTNFLLKDIFCLKGKLDTQQLRLKHKILVNALYKSAKRKKESDLNDNERDIVRAYEDDSQIDLNKLDGVLDRL
3KLB Chain:A ((5-150))
RKILVAYFSCSGVTKAVAEKLAAITGADLYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVGFPVWWYIAPTIINTFLESY--DFAGKIVVPFATSGGSGIGNC-----EKNLHKAYP--DIVWKDGKLLNGQITR-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61424 for 782 contacts (-78.5/contact) +
2D Compatibility (PS) -11645 + (NN) -4145 + (LL) 4160
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -78454.0 ( -100.32 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3KLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KLB-query.scw
PDB file :
Tito_Scwrl_3KLB.pdb
: