Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRKQSIQKTQLSKTKKQTLNVTIDRPIGYTDKFGNV---YPLNYGFVEGVIGGDGEEQDVYVLSRKISEPIDTFQGDLIAVITRNDDVE-DKWVVAAPNE--NFTIEEIREK-----------VHFIEQYFDSEIKLI
3D53 Chain:A ((41-146))
------------------------------FVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLE----
General information:
TITO was launched using:
RESULT:
Template:
3D53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22670 for 486 contacts (-46.6/contact) +
2D Compatibility (PS) -9252 + (NN) -2762 + (LL) 2860
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -40124.0 ( -82.56 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3D53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D53-query.scw
PDB file :
Tito_Scwrl_3D53.pdb
: