Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQ-PPKKEA-----EKMDERFEKIYTQGKLNIMEIWVDKETGVQYVYHFAGYAGGMSPLLDVDGKPLLADLSKL-NGAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4O5P Chain:A ((5-815)) | NFGFHIAPTHPVAGRLTYDSKKLSENILKQQSDERVFSRAQCCKAIHITLGFDGTNNNDKADGSSVSPSCSNVARLIHASIGSGDDINSRGIFKYYCPGVGTVFPDIKEFTPSNMGLIGAEGGENRINWGLVQLVDALFYTLLKSRLKLNDVQGLVEEMSTNWTVSTLTGGLLENGEKKRRAALEPKLKELEEKLRQRQNSGQKPHILAMRLYIYGFSRGAAEARAFANWLQELTRVSDADGRVEYRFAGLPISIEFLGLFDTVAAVGLPFAAGHMDWADDTMRLPDEALPEDCSFLKRCVHLVSCHEQRASFPLDSIRRRDMNGRRTGPSCYRKWTVEYAYPGVHSDVGGGYGVGNQGKAVGGSEFLLSQIALQHMYAEAFEAGAPLQVPEWRVMVPKIEAEFSVSEELATRFNAWQAQAKAGPLEEVIRRETALITAWRIDRYAGGLRN------KAFFANVPPDMPEAQQKAWEALHKRRSREYAAAQQLPPMSAAEQAEWDRNVALIGGEDQLRDLRVEKQFDPPLDQRQLLGAAAEFAHDYKGDWGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQIHRDGSARYHQLFSAPDRVAPGQEKLVALFDEQVHDSRAPFTDYFRYRLVHFDNESNKRLSVLATAGRVVGVGVMLASVGLSVKRRDPRMLLGGLPEISAFDPLTGIALPMVGGAALDNLRAFTREPGDKVEQIGQLPPPPPLAVAAVQSPALQQVLLAQQTV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3801 for 258 contacts (14.7/contact) +
2D Compatibility (PS) -6976 + (NN) -2234 + (LL) 220
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -8539.0 ( -33.10 by residue)
QMean score : 0.023
|
|
|