Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFFRGMIGFCIAGMIVMSVWTPLAENYGIFGGYLAAFIIIGPMWFMNHYVGLIENDEDAAFVDMAVGIGICGIMRDVFMQGGGELVSSLPTIGLVAIGAVLAGIVAAAIEKDMAKKQEAKQEKTEPGMNMKEEERLNENQLV
2ZRV Chain:A ((267-312))
----------------------------------------------------------------------------DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQ---------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZRV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7479 for 237 contacts (-31.6/contact) +
2D Compatibility (PS) -4667 + (NN) 1134 + (LL) 7464
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -5798.0 ( -24.46 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_2ZRV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZRV-query.scw
PDB file :
Tito_Scwrl_2ZRV.pdb
: