Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNR--NPKTATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYG-VTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3HNP Chain:A ((3-338)) | -LTMGFIGFGKSANRYHLPYLKTRNNIKVKTIFVRQINEELAAPYEERGVYFTTDLDELLNDKEIQVVTICTPAHTHYELAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGDFLAVKQVVEQGFLGDIIEIESHIDYFRPG--SITHEAPKEEGSFYSLGIHTMDRMISLFGRPNTVTYDIRNNEVEGAVDNYFDVGLHYGNQLKIKLKTNHIVAKDYPRFIVHGTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGIAKYRNANGDWIEKQIKTPLGDYGRFYDAAYDTIVNGAPKLVKDEEAVTNIEILENGFAA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132505 for 2737 contacts (-48.4/contact) +
2D Compatibility (PS) -36301 + (NN) -16458 + (LL) 392
1D Compatibility (HY) -26400 + (ID) 7800
Total energy: -219072.0 ( -80.04 by residue)
QMean score : 0.481
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