Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIGPGSIALIVGAALVIFGPKKLPELGRAAGDTLREFKNATKGMMDDSKEETKKEDLRP
2L16 Chain:A ((1-52))
MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE----------
General information:
TITO was launched using:
RESULT:
Template:
2L16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3916 for 205 contacts (-19.1/contact) +
2D Compatibility (PS) -5135 + (NN) 433 + (LL) 552
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -15016.0 ( -73.25 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2L16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L16-query.scw
PDB file :
Tito_Scwrl_2L16.pdb
: