Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTERKVSWLELFFDLIFVTAVASTTHLLLSVDNHPDKTAAYFGEYLLMVTPMFWAWVGQTMFFN--RFGE-KIKWPELYMLSQMFFLILMTASFDLTFSNTYYTFLIGYLGIRFITVIQYFVISKQLTGNAQKVA-LL-----LGSVFLLGVLTTATSVFFEGFARYLVMYLGIAVDIILPLFLAKTLRKVPVDFPHLAERFGLFVIITFGESIVAITTILVGHTLDLYTICYTLLG--FLIICTLWASYFYSFEKIVDHHKVTHGQFLIYGHFFIIVSVMLLAVNLHLL-FEGHLQRD--------VLLLLLFSSVAVFFISKQFVFAAH-K-KAEVSFSFWKDALLLLLL-VGLFFVNLYINLPLFVSFVSIWICALVDLGLQFGTSRSVRM----- |
| 4UY5 Chain:A ((2-327)) | -TLSLANYLA---------ADSAAEALRRDVRAGLTAAPKSLP------PKWFYDAVGSDLFDQITRLPEYYPTRTEAQILRTRSAEIIAAAGAD--------------------TLVELG------SGTSEKTRMLLDAMRDAELLRRFIPFDVDAGVLRSAGAAIGAEYPGIEIDAVCGDF-EEHLGKIP----HVGRRLVVF----LGSTIGNLT--PAPRAEFLSTLADTLQPGDSLLLGTDLVK---DTGRLVRAYDDAAGVTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRARTAQHVRVAALDLEVDFAAGEEMLTEVSCKFRPENVVAELAEAGLRQTHWWT-----------------DPAGDFGLSLAVRLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294015 for 2294 contacts (-128.2/contact) +
2D Compatibility (PS) -30608 + (NN) 3931 + (LL) 7968
1D Compatibility (HY) -1600 + (ID) 3450
Total energy: -317774.0 ( -138.52 by residue)
QMean score : 0.116
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