Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMIGPIIIAVLIIIFLIVFFTLVPVGLWISALSARVPVGLGTLIGMRLRRVVPSRVVKPLIKAVKAGLDLEVNQLESHYLAGGDVDNTVDALIAAHRANIE--LDFSRAAAIDLAGRDVLEAVQT---SVTPKVIRTPEFTGVAQNGVEVKVITQITVQSNIERIVGGAGEDTVIARVGEAVVSTVGETREHTDVLENPNSISKKVQEQGLGDGTAYTILSIDIAEMRIGDNIKAKLDIEKANADMEVAQAAASKRKAEAIALEQENRAAVVAAEAEVPRALSRALEEGNLGVMDYYKMENVQSDTAMRESIAHEDEK |
| 4UJ5 Chain:C ((23-194)) | ----------------------------------------------------------QPIVKDCKEADLSLYNEFRLWK-DEPTMDRTCPFLDKIYQEDIFPCLTFSK----SELASAVLEAVENNTLSIEPVGLQPIRFVKAECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYIQ-----------QGLVKQQDVDQMFWEVMQLR-KEMSLAKLGYFKEE--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4029 for 1060 contacts (3.8/contact) +
2D Compatibility (PS) -17371 + (NN) -683 + (LL) 14584
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -7841.0 ( -7.40 by residue)
QMean score : 0.208
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