Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQEMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEVASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITATDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIKVTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGANVIPDKVIFTVDIR-AKDEI--HVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEIHQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDKLQKGIEVVLKTVKKWTEESANESENKTNSFK |
| 3N5F Chain:B ((5-402)) | -----ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL-ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETI-AKERN-VRVTTERLQEMPPVLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLAPICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTV------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173516 for 3454 contacts (-50.2/contact) +
2D Compatibility (PS) -43617 + (NN) -20188 + (LL) 1556
1D Compatibility (HY) -27600 + (ID) 8000
Total energy: -271365.0 ( -78.57 by residue)
QMean score : 0.553
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