Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILTGT--INELLNEVKAENNTNNSLQVESEVKSIIEKVKKDGDQALFDFTSQFDGVRLTELRVQTADIQSASSKVDPAFLVALQQAKANIESFHSKQKQHAFLDSEKDGVIRGQLIRPLETVGIYVPGGTAAYPSSVLMNVLPAKIAGVKRIVMITPPAENGINPHVLAAAQLAGVDEIYQVGGAHGIAALAHGTESIPKVDKIVGPGNIYVATAKREVF---GLVDIDMIAGPSEIVVLADENANPAFIASDLLSQAEHDILARAILITTSKKIAEETQNEINKQLENLPRKAIAQKSIETQGKIIIAANTQEMFDIMNEIAPEHLEVQLENPMNYLNQIKNAGSIFLGSYASEPLGDYFAGPNHVLPTSGTAKFFSPLGVEDFTKRSAFISYTKEALAKEKDAIVLLAKKEGLDAHAKAIQIRFEEEN |
| 1KAE Chain:A ((5-430)) | -TIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP---IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMARRVAEAVERQLAELPRAETARQAL-NASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163451 for 3499 contacts (-46.7/contact) +
2D Compatibility (PS) -45670 + (NN) -19896 + (LL) 84
1D Compatibility (HY) -30000 + (ID) 8450
Total energy: -267383.0 ( -76.42 by residue)
QMean score : 0.556
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