Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDKQSGIPIYIQIQSEIKKKMEDGVWKVGTSIPAERQLAEMFHVSRMTVRQAIQGLVDDNILQRRVGAGTFIAEKKLTERLEAVTSFTNLMLQEGKVPSTRIVSYGIRPASTQEQEALQLPENSNVMKIERIRYGDRVPILYEVAAIPEKIASLLTKEDIMDSLYKAIELKLGQPIGEAEQIMEASLVSEKIAPYLDVKLGSPVMKLRQITTLEDGRPFEFTRSQYVGSRFQFVARIKQ |
| 4U0W Chain:A ((6-239)) | -INKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTEDMKSRGMTPGSRLIDYQLIDSTEELAAILGCGHPSSIHKITRVRLANDIPMAIESSHIPFELAGELNESHFQSSIYDHIERYNSIPISRAKQELEPSAATTEEANILGIQKGAPVLLIKRTTYLQNGTAFEHAKSVYRGDRYTFV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81628 for 1696 contacts (-48.1/contact) +
2D Compatibility (PS) -25265 + (NN) -3822 + (LL) 840
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -129625.0 ( -76.43 by residue)
QMean score : 0.496
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