Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LNHWEDFLAPYKQAVEELKIKLKGMRSQFELENNHSPIEFVTGRVKPVASILDKANQKHIALDHLVEEMQDIAGLRMMCQFVDDIEVVVRLLRQRNDFRIVEERDYITNKKPSGYRSYHVVIEYPVETIQGEKKILAEIQIRTLAMNFWATIEHSVNYKYQGEFPEAINKRLKRAAEAAFQLDEEMSQIREEIQEAQVYFSQNKDVSKDKKAVHQVMPKKNK
3L9D Chain:A ((2-199))
--NWEEFLDPYIQAVGELKIKFRGIRKQFRKQKRHSPIEFVTGRVKPIESIKEKMVLRGIKKENLTQDMQDIAGLRIMVQFVDDVNDVLELLRQRKDMKVIQERDYINN-KPSGYRSYHVIVEYPVDTISGQRIIMAEIQIRTLAMNFWATIEHSLNYKYHGEFPEDIKRRLELTSKIAFQLDEEMRQIRDDIKEAQLLF----------------------
General information:
TITO was launched using:
RESULT:
Template:
3L9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92001 for 1400 contacts (-65.7/contact) +
2D Compatibility (PS) -21239 + (NN) -9080 + (LL) 1312
1D Compatibility (HY) -24800 + (ID) 6400
Total energy: -152208.0 ( -108.72 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3L9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9D-query.scw
PDB file :
Tito_Scwrl_3L9D.pdb
: