Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEALENMVRNILQEVNSGGVSTTTSQKVSGDTLTVRDYPLGTKRPELVKTSTSKSLDDITLKSVLDGTIKPEDVRVTAETLKMQAQVARDAGRATLANNFERAAELTIVPDERILEIYNAMRPYRSSREELLAIADELESVYHATICSNYVREAAQLYQERKKLKGDN
1EEX Chain:G ((37-173))
---------------------------------SARVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLESRYQAKICAAFVREAATLYVERKKLKGDD
General information:
TITO was launched using:
RESULT:
Template:
1EEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20484 for 929 contacts (-22.0/contact) +
2D Compatibility (PS) -15134 + (NN) -9190 + (LL) 1852
1D Compatibility (HY) -14000 + (ID) 4500
Total energy: -61456.0 ( -66.15 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1EEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EEX-query.scw
PDB file :
Tito_Scwrl_1EEX.pdb
: