Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKL-YGEVSQPIKMYYNEPMFRYERPQGGRQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILDFLNEESVAYFENVKNYLNALEIPFEIDPTMVRGLDYYNHTTFEIMSVEEG-FGAKTTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLALEKADIEIPAKKPLEVYVITAQPEAELKGVTLVNKLRQNGISAEKDYLKRKFKAQLKDANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK |
| 1QE0 Chain:A ((1-420)) | -MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFAR-----------EMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGN-PNQPIKLYYNGPMFRY-------YRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTDPMRIL------------TAPRITDFLNEESKAYYEQVKAYLDDLGIPYTEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162067 for 2941 contacts (-55.1/contact) +
2D Compatibility (PS) -41430 + (NN) -17724 + (LL) 796
1D Compatibility (HY) -44400 + (ID) 10300
Total energy: -275125.0 ( -93.55 by residue)
QMean score : 0.502
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