Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAK-TEARADSFTSSEMDQGLHIGNWHWKELG
4HQW Chain:A ((177-215))
--------------LALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSE----------------
General information:
TITO was launched using:
RESULT:
Template:
4HQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6348 for 181 contacts (35.1/contact) +
2D Compatibility (PS) -4058 + (NN) -319 + (LL) 1648
1D Compatibility (HY) -1200 + (ID) 900
Total energy: 1519.0 ( 8.39 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_4HQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQW-query.scw
PDB file :
Tito_Scwrl_4HQW.pdb
: