Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VIPIELSPRQHQIVAYVRANEPATGDSIAAHLKLTRATIRADLSILTMTGILDARPKVGYFYSGLETNPIHFDEIRQLKVADIMTQPFFAKKETSVYDAIVMLFMEDIGSLYVINE-ELLVGLVSRKDLLKGALADADTKATPIATIMTRMPNLVTVTKNDTVLHAAEQLVFHQIDSLPVLEN----AKVVGKISKTRITALFVDTIKKV
3FV6 Chain:A ((73-208))
------------------------------------------------------------------------DKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE--
General information:
TITO was launched using:
RESULT:
Template:
3FV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76704 for 948 contacts (-80.9/contact) +
2D Compatibility (PS) -13710 + (NN) 76 + (LL) 5524
1D Compatibility (HY) -16800 + (ID) 2500
Total energy: -104114.0 ( -109.82 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3FV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FV6-query.scw
PDB file :
Tito_Scwrl_3FV6.pdb
: