Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAK-RADFAIKLCDREHSLGGADGILYVTKSSEAGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEAKVETMKAILDVKKATSLGFDIPTYQ------VEISPVKFNAESLPMNVGVEKLFNQVVPEL---DAELAFSAVSVPNPHLITFVDQ-----TVLDSDRQETLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACSLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGDISLQLIGNATFVSTGSVSYESDTVTELTNEATPEQAQYQELVKEVKEFLKTTE |
3EJX Chain:D ((25-308)) | -GVLHFVKYHGLGNDFILVDNR-----DSSEPKITQEQAAKLCDRNFGVG-ADGVIFAMPGVN-GTDYAMRIFNSDGSEPEMCGNGVRCFARFI--------AELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHE--MFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG--ACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQE---DNHIYMTGPAEAVFYGS------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125833 for 2398 contacts (-52.5/contact) +
2D Compatibility (PS) -28920 + (NN) -11176 + (LL) 4604
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -179675.0 ( -74.93 by residue)
QMean score : 0.484
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