Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILLAYDSLSGNTKMVADEIEEILISEGHEVVSFRVSPLAEYPLDEDFDLYVLGA--WTVDYGRTPPD---MKDFIAELAVKPKNVAIFGTGETQWGMDFYCGAVDRMA---KYFGTS--YPTLKIEQMPHTEQDVADIDNWVRKILALRSGIK
5FX2 Chain:A ((2-143))
-KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSY--EYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARD--DIVGWAHDV--------
General information:
TITO was launched using:
RESULT:
Template:
5FX2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79829 for 1032 contacts (-77.4/contact) +
2D Compatibility (PS) -13849 + (NN) -4603 + (LL) 1244
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -104837.0 ( -101.59 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_5FX2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FX2-query.scw
PDB file :
Tito_Scwrl_5FX2.pdb
: