Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAKMLHTCIRVKNLTESITFYEKALGLKEVRRKDFPDFEFTLVYMAF--EEGGFELELTYNYDQKEAYDLGNGYGHLAVGVLDVRALLKEHQEAGFTVTDLKGLPGE-DPFYYFLTDPDGYKTEIIQDGAL
4MTS Chain:B ((2-127))
---RILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWD-RDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKG--
General information:
TITO was launched using:
RESULT:
Template:
4MTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51270 for 825 contacts (-62.1/contact) +
2D Compatibility (PS) -13730 + (NN) -5825 + (LL) 844
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -83281.0 ( -100.95 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4MTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTS-query.scw
PDB file :
Tito_Scwrl_4MTS.pdb
: