Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKSKLFLTLGLTLLLSLVLVACGGGSDSKSDKKGSDSGKASGEQVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIAGAAEEPKISDDKTVYTIKLREDAKWSNGDPVTANDYVYSWRRAVDPNTAATYSYLFDAIKNGGDIVAGKKKPEELGIKAVDDYTLEVTLSKPTAYINSLFAFPTFFPLNEKFVTEKGEKYAQNSDNMLFNGPFELKDW--TGTNKKWTYVKNDKYWDKDKVKLKQINVQVVQDSGTGLNLYNTDKVDRTVLSADYAAQNKNNKDYVTVNDSSTFYIKFNQKRAGKDTVFANKNIRKAIALAIDKQSYTDTVLKNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLKELGVNEIT-VEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQNDQNQDYDFSMSGWGPDYQDPSTFLDLFVTDGAQNRMSYSNKDYDKILNDASVTYAADDQKRWDEMVKAEKILLTDDVAIQPLYQRSTAYLQKDYIKNLQKNPFGPDYTYKETYLTK |
| 4FAJ Chain:A ((58-564)) | ------------------------------------------VEQVATLTAGTPVQSLDPATAVDQTSITLLANVMEGLYRLDEKNQPQPAIAAGQPKVSNNGKTYTIVIRDGAKWSDGTQITASDFVAAWQRVVDPKTVSPNVELFSAIKNAKEIASGKQAKDTLAVKSIGEKTLEIELVEPTPYFTDLLSLTAYYPVQQKAIKEYGKDYGVSQKAIVTNGAFNLTNLEGVGTSDKWTISKNKEYWDQKDVSMDKINFQVVKEINTGINLYNDGQLDEAPLAGEYAKQYKKDKEYSTTLMANTMFLEMNQ--TGENKLLQNKNVRKAINYAIDRESLVKKLLDNGSVASVGVVPKEMAFNPVNKKDFANE--KLVEFNKKQAEEYWDKAKKEIDLSKNTSLDLLVSDGEFEKKAGEFLQGQLQDSLEGLKVTVTPIPANVFMERLTKKDFTLSLSGWQADYADPISFLANFETNSPMNHGGYSNKNYDELLKDSS-------SKRWQELKKAEKLLI-NDMGVVPIFQVGTAKLEKSKIKNVLMHSIGAKYDYKKMRIEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23713 for 4360 contacts (-5.4/contact) +
2D Compatibility (PS) -54089 + (NN) -25525 + (LL) 2192
1D Compatibility (HY) -38400 + (ID) 9900
Total energy: -149435.0 ( -34.27 by residue)
QMean score : 0.404
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