Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPYTTLEFYTNEYA----GEHLEQDEFDKLLKHAERKIDSVTFYRIRKSGIESFSEFIQHQIQLATCNQIEYFKE-AGGTSELAVSKPDNVSIGRTSISDSNFASTATSLNSGLIGSDVRTYLAPTG--LLYSGVGVR
1XN8 Chain:A ((1-127))
MLLITPDELKS-YSVFESVKTRPDELLKQDILEATADIILKVGHDFSDAEYIPLP----ETVRLALLKLSQFYALINGDES--IIKGYTTEKIGDYSYTLGDGSS----LQKPDVYALIKDYVKPADPDLEGIEAKVR
General information:
TITO was launched using:
RESULT:
Template:
1XN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19547 for 788 contacts (-24.8/contact) +
2D Compatibility (PS) -12888 + (NN) -5070 + (LL) 1164
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -41691.0 ( -52.91 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1XN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XN8-query.scw
PDB file :
Tito_Scwrl_1XN8.pdb
: