Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLDKLLSHTGFGSRKEVKPLLKSGAVVVNGTIQKDSKTQVNPDKDQITVHGTPV-VYQEFVYFMLHKPQNVVSATEDNVSETVIDLLAQEDTLTDPFPVGRLDKDTEGLLIITNDGTLAHNLLSPKKHIDKTYYAKIDGDVTAEDVEAFAAGIELDDG-YTCKPARLEIITPNEIKVTIQEGKFHQVKRMFAARGKSVSYLKRISMGNLQLDESLALGEYRPLTEAELAILQNK |
1KSK Chain:A ((4-233)) | MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLP-EHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPV-AWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASV--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84015 for 1611 contacts (-52.2/contact) +
2D Compatibility (PS) -24035 + (NN) -8442 + (LL) 80
1D Compatibility (HY) -14800 + (ID) 4550
Total energy: -135762.0 ( -84.27 by residue)
QMean score : 0.556
|
|
|