Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEEV-EIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLNDAN |
2B3T Chain:B ((7-354)) | --AKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQV--------------------------------------QQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ------RRN-------SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40214 for 2157 contacts (-18.6/contact) +
2D Compatibility (PS) -32481 + (NN) -16676 + (LL) 4052
1D Compatibility (HY) -24000 + (ID) 7950
Total energy: -117269.0 ( -54.37 by residue)
QMean score : 0.408
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