Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFKSKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISVREMGSKDMEFIDPSIVEYLYERVNEKVKEMVPSK-NS-AQEADAISLILNSVILLIMVEKVRDDIYKRPPTITTTADSLADVLLKLLK
2F07 Chain:A ((10-194))
-GKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLH-GDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDHSMEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERFYIGFE--QDENVEVYKKEIFTFLKRSL-
General information:
TITO was launched using:
RESULT:
Template:
2F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76668 for 1317 contacts (-58.2/contact) +
2D Compatibility (PS) -19818 + (NN) -10336 + (LL) 492
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -111530.0 ( -84.68 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F07-query.scw
PDB file :
Tito_Scwrl_2F07.pdb
: