Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIYFGKDAALNQAIQSRLDSYQIDYQAFSSK--DIDAKTLMEWLFKSTD-IFELLSTKMLKYKLNT----QITLSQFVRKILKDVNSTLKLPIVVTDEVIYSNMSPDYVTVLLPKEYRKIKRIQLMRKMEQLDEGRLFWKNFELFRKQSELRWFELNELLFADVSDDLGEIKKAKDRFFSYKKNNQVPPNEIIERILKIFLVDREDFFKKSPSDLQNF
3L78 Chain:A ((1-117))
MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELINLISKNPS-LLRRPIIMDNKRMQIGFNEDEIRAFLPRD------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3L78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83423 for 771 contacts (-108.2/contact) +
2D Compatibility (PS) -11744 + (NN) -3608 + (LL) 8120
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -96655.0 ( -125.36 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_3L78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L78-query.scw
PDB file :
Tito_Scwrl_3L78.pdb
: